mosaicmpi.network.Network.consensus

Network.consensus(method: str = 'median', min_k: int = 2) → DataFrame

Generate a ‘consensus’ program for each community and dataset by taking the median of all constituent programs, separately for each dataset.

Parameters:

• method (str, optional) – Choose from: “mean”, “median”. Defaults to “median”

• min_k (int, optional) – Minimum k value to filter programs prior to consensus, defaults to 2

Returns:

Communities-Datasets × variables consensus matrix

Return type:

pd.DataFrame