mosaicmpi.integration.Integration.get_metadata_correlation

mosaicmpi.integration.Integration.get_metadata_correlation#

Integration.get_metadata_correlation(layer: str, subset_datasets=None, method: str = 'pearson') → Series#

Calculate correlation of programs usage to numerical metadata across samples/observations.

Parameters:

  • layer (str) – name of numerical data layer

  • subset_datasets (str or Iterable[str], optional) – dataset name or iterable of dataset names to subset the results, defaults to None

  • method (str, optional) – Correlation method: “pearson”, “spearman”, or “kendall”. Defaults to “pearson”

Returns:

correlation of programs to metadata

Return type:

pd.Series

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